Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016-
06-02] 308,480 sequences; 997,399,373 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq1870 132 6e-26
>seq1870
Length=13139
Score = 132 bits (146), Expect = 6e-26
Identities = 126/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 32670 GCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATA 32729
|| || |||| |||| | |||||||||| || |||||| | ||||| | ||||||||
Sbjct 420 GCTTTATGGTGGTATTATGTCTCTAAAGGAATTGAATATTTGGATACAGTATTCTTCATC 479
Query 32730 ATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTT 32789
|||| ||||||||||||||| |||| || | || || || |||||||| ||||||||
Sbjct 480 CTGAGGAAGAAATTTAACCAAATTAGTTTCCTTCATGTCTATCACCATTTCACCATGTTC 539
Query 32790 ACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
|| || | ||||| || ||||| ||| ||||||| |||||
Sbjct 540 ACCTTGTGGTGGATTGGTATTAAGTGGGTTGCAGGTGGACA 580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 600854934835200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |