Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20plumbeitarsus_20[genbank_20GCA_5F001655115.1_202016- 06-02] 308,480 sequences; 997,399,373 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2417 91.5 4e-13 >seq2417 Length=632 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || ||||| || ||||| |||||||| |||||||| || || | Sbjct 99 CAGATCTTCGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTGGA--GCCCAATG 42 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAA 178022 |||||||||||||||| ||| ||||| |||||||| ||| Sbjct 41 ACACCATCGAGAACGTGAAAGCCAAGATCCAGGACAAGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1198973572805120