Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20trochiloides_20viridanus_20[genbank_20GCA_5F001655095
.1_202016-06-02] 158,605 sequences; 1,003,330,590 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq58196 95.1 8e-15
>seq58196
Length=6548
Score = 95.1 bits (104), Expect = 8e-15
Identities = 79/95 (83%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGT---AATCTCGT 25956
|||||||||||||||||||| |||| ||| |||||||| ||| | || ||||||||
Sbjct 2436 AAGCCCGTTCCCTTGGCTGTCGTTTTGCTGGATAGTAGGTAGAGACAGTCAGAATCTCGT 2495
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||| | ||||||||||||||| ||
Sbjct 2496 TCATCCATTCATGCACATCACTAATTAGATGATGA 2530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334299747585755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |