Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20trochiloides_20viridanus_20[genbank_20GCA_5F001655095 .1_202016-06-02] 158,605 sequences; 1,003,330,590 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq58196 95.1 8e-15 >seq58196 Length=6548 Score = 95.1 bits (104), Expect = 8e-15 Identities = 79/95 (83%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGT---AATCTCGT 25956 |||||||||||||||||||| |||| ||| |||||||| ||| | || |||||||| Sbjct 2436 AAGCCCGTTCCCTTGGCTGTCGTTTTGCTGGATAGTAGGTAGAGACAGTCAGAATCTCGT 2495 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||||| | ||||||||||||||| || Sbjct 2496 TCATCCATTCATGCACATCACTAATTAGATGATGA 2530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334299747585755