Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phylloscopus_20trochiloides_20viridanus_20[genbank_20GCA_5F001655095 .1_202016-06-02] 158,605 sequences; 1,003,330,590 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq94697 86.0 5e-12 >seq94697 Length=22288 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 108475 GATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAACGCCAACAGG 108534 || ||| | || |||||||||||||| || ||| || ||||||||||||||| | || Sbjct 2829 GACCACCGCGTGCACCACAAGTACTCGGAGACGGACGCGGACCCACACAACGCCCGCCGG 2770 Query 108535 GGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGACGTGATC 108591 || |||| ||||| ||| | || |||||| | || |||| ||| |||||| ||| Sbjct 2769 GGCTTCTTCTTCTCCCACATCGGCTGGCTCTTCGTGCGCAAGCACCGCGACGTCATC 2713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381034833774120