Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20trochiloides_20viridanus_20[genbank_20GCA_5F001655095
.1_202016-06-02] 158,605 sequences; 1,003,330,590 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq25636 96.9 3e-14
>seq25636
Length=10948
Score = 96.9 bits (106), Expect = 3e-14
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450
||||| |||||||| | ||||| ||||| ||||| |||||||| || || || || ||
Sbjct 8833 GTTACCAATGCAGTAGTGACTGTCCCAGCCTATTTCAATGACTCCCAGCGCCAGGCAACA 8774
Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510
|||||||||||| ||| || || || || || || | || ||||| || || || ||
Sbjct 8773 AAAGATGCTGGAACTATCGCAGGGCTCAACGTCCTGAGAATCATCAACGAGCCCACAGCA 8714
Query 550511 GCTGCACTTGCATATGGACTTGATAA 550536
||||| |||| || || || || ||
Sbjct 8713 GCTGCCATTGCCTACGGGCTGGACAA 8688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4020908252291450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |