Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phylloscopus_20trochiloides_20viridanus_20[genbank_20GCA_5F001655095
.1_202016-06-02] 158,605 sequences; 1,003,330,590 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq65683 138 8e-28
>seq65683
Length=849
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
|||||| |||| ||| | || ||||| ||| || ||| || || ||||||||||| ||
Sbjct 85 CATTCCACCTCGCAGGCGCAGCACCAAGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTC 144
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || |||| ||||||||||| || || || |||| | ||||||||| |
Sbjct 145 GGACAGGGTACGACCGTCTTCCAGCTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCAGG 204
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | |||||||| || ||||| ||| | || | ||||||||| || ||
Sbjct 205 AGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATGGTGTCGCTGGGCTC 264
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| ||||| |||||||| |||||||| |||||
Sbjct 265 CACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359294539119285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |