Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1619 102 8e-17 >seq1619 Length=3721367 Score = 102 bits (112), Expect = 8e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||| || ||||||||||| || || || || | ||| |||||||| |||| || | Sbjct 1314462 CCTCATCCCTGCTAATAAGTTCATTGGAGAAGGTCAGTCCAGGCATCAAGCCTCTCTTCT 1314521 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | |||||| || ||||| || || || || ||||| || || |||||||||||||| | Sbjct 1314522 TCAGCCAAAAGATAGCAGCAAAGGAACCCGAGAAGAAGATGCCTTCAACTGCAGCAAAGG 1314581 Query 13802 C 13802 | Sbjct 1314582 C 1314582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478401827320560