Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1619 114 2e-20 >seq1619 Length=3721367 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| || || ||||| ||||| ||||| || || ||||| ||||| | ||| | ||| | Sbjct 1314462 CCTCATCCCTGCTAATAAGTTCATTGGAGAAGGTCAGTCCAGGCATCAAGCCTCTCTTCT 1314521 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | |||||||| || | ||| || || || || |||||||| ||||| ||||||||||||| Sbjct 1314522 TCAGCCAAAAGATAGCAGCAAAGGAACCCGAGAAGAAGATGCCTTCAACTGCAGCAAAGG 1314581 Query 33446 CAATAAGTCTCTCTCC 33461 ||| | |||||| || Sbjct 1314582 CAACCACTCTCTCACC 1314597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622703830102640