Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1619 82.4 9e-11 >seq1619 Length=3721367 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 126080 ATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATC 126139 || |||||||| |||||| |||||| ||||| | || | |||||||| ||| || || Sbjct 1314476 ATAAGTTCATTGGAGAAGGTCAGTCCAGGCATCAAGCCTCTCTTCTTCAGCCAAAAGATA 1314535 Query 126140 GCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| ||| ||||||||||||||||| || || || Sbjct 1314536 GCAGCAAAGGAACCCGAGAAGAAGATGCCTTCAAC 1314570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597120228882320