Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq535 105 6e-18 >seq535 Length=245707 Score = 105 bits (116), Expect = 6e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTA 146739 |||| ||||||||| | |||||||||||||||||||||| |||||| || | ||||| Sbjct 94331 TACTCCACAATCTCAGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGTTG 94272 Query 146740 CTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777 || | ||||||||| |||||||||||||||||| || Sbjct 94271 CTCTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTAGGG 94234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475315033724960