Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2132 84.2 3e-11 >seq2132 Length=409716 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 |||| || | | ||| || || || |||||| ||| || ||||| || || | ||||| Sbjct 89871 CCTCATCTCTGCTGATCAGCTCGTTGGAGAAGGTCAGGCCAGGCATCAGCCCTCTCTTCT 89812 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 127647 ||| |||||| || | ||| |||||||||||||||||||||||||| Sbjct 89811 TCAGCCAGAAGATGGAGGCAAAAGAGCCAGAGAAGAAGATCCCCTCCAC 89763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613267518074640