Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3246 82.4 7e-11 >seq3246 Length=3797831 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||||||||| | ||| || |||||| ||||| || || | | Sbjct 817059 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCA 817118 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| |||||||| || |||||||| || || || || |||| Sbjct 817119 AAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACA 817178 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | |||||||| || | || | || || |||||||| || || Sbjct 817179 TTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTC 817238 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 817239 ACAAAGATCTGCATG 817253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476424999919440