Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picoides_20pubescens_20[refseq_20GCF_5F000699005.1_202014-06-06] 31,254 sequences; 1,167,323,935 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1619 91.5 1e-13 >seq1619 Length=3721367 Score = 91.5 bits (100), Expect = 1e-13 Identities = 99/130 (76%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 4922 AAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 ||| |||||| || | |||||| ||||| || || ||||||||||||||||| |||| || Sbjct 1318439 AAAGCTTTCTCACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAA 1318498 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 |||||| || ||||||| || || | || || || | |||||| || | || || | Sbjct 1318499 TATGAGAGATGAAGTACTTCTCATCTGCTTTCAGCTTGTCCCAGTGAGGAAGGTCCTTTG 1318558 Query 5041 TTAAATCAAC 5050 |||||||| Sbjct 1318559 ACAAATCAAC 1318568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426886933337582