Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq69190 134 2e-26 >seq69190 Length=4784 Score = 134 bits (148), Expect = 2e-26 Identities = 184/257 (72%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 83143 GAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTG 83202 |||||||||||||||||||| | |||||||||||| || || |||||| ||| ||| Sbjct 328 GAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCAGACGGGGGACCAGATGATGTTCTG 269 Query 83203 GGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGCCTCTCGTAGGAA 83262 |||| | || || | | ||||||| || ||||| |||||| ||||| Sbjct 268 CGGGTTGGACATCAGGGAGGAGGGGTCGTCGTGCGGGAAGGGCAGCGCCTCTTTCAGGAA 209 Query 83263 GGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTT 83322 || |||||| || || || | ||||| ||||||||||||||||| | || || | Sbjct 208 GGTGAAGAGGGGGTGCGCGTTCTTCCCGTTCACCTCGCACTTCTCGAACATGATGAAATC 149 Query 83323 CGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATTCTG 83382 |||| | ||||||| |||||||| ||||||| || || ||| |||||| | ||| Sbjct 148 GGGCTTGTAGCCGTTGCCAGGACGAACGTGCTCTAGTGAGAGCAGGATCTCCTCGTTCGT 89 Query 83383 GGCGTTTTCCTGGTGAC 83399 | ||||||| | ||| Sbjct 88 AGAATTTTCCTAGGGAC 72 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608165759286920