Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq71938 84.2 2e-11 >seq71938 Length=13335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 ||| ||||| |||||||| ||||| | |||||||| ||||| || ||||||||| || Sbjct 13010 AGGCATTCCTCCTGACCAGCAGCGACTGATTTTTGCTGGCAAGCAGCTAGAAGATGGACG 12951 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAG 25188 ||| || ||| |||||||||||||||| Sbjct 12950 CACGCTGTCCGACTACAATATTCAAAAAG 12922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432890068296245