Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq56282 95.1 1e-14 >seq56282 Length=20701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| ||| || || | || |||||||||||||| ||| ||||| || || |||||| Sbjct 11910 TACTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTCCCCAAGTTCTGTTGATTG 11969 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 153751 || || |||||||| | ||||||| | |||||||||||| ||| ||||| Sbjct 11970 CTCTTCCGATTGCAAGAGTCTTTGTAAAGCATGTACGGTGTGCCTGTCTC 12019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495748005412560