Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq56282 111 2e-19 >seq56282 Length=20701 Score = 111 bits (122), Expect = 2e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||||||||| | ||||||| | ||||||| |||||| || || |||| Sbjct 5073 CCTGCTTCCACCCGTAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGTTCTGCAATGT 5132 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| ||||||||||| || || ||||||| | | || || ||||| |||| | Sbjct 5133 GGATGTTGAGAGACTGGCTCTGATCAATGAAAGCTCCTCTGTCCGCTGCCATCTTGAGGA 5192 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||| ||||| || ||||||||||||||||| Sbjct 5193 CGGTTTTCTGGGAGATCTCCCACACCGTCTT 5223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794330991816880