Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq14992 114 3e-20 >seq14992 Length=4940 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || | ||| || || || ||||| |||| ||||||||| | ||| || | ||||| Sbjct 4740 CAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATC 4799 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || |||||||| || | |||||| || || ||| ||||| || Sbjct 4800 CTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 4859 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 4860 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 4919 Query 199597 CTTACCCGTGAGAGTTTTCAC 199617 ||| || || || |||||||| Sbjct 4920 CTTGCCTGTCAGGGTTTTCAC 4940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177669053640841