Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq14992 114 8e-21 >seq14992 Length=4940 Score = 114 bits (126), Expect = 8e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 || || ||||||| | ||| |||| ||| | |||| |||||||| ||||| ||||| Sbjct 4723 TTACCACCCCTCAGGCGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCG 4782 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || | | ||||| |||| ||||| ||||| || ||||||||||| | ||||| || | Sbjct 4783 GACAAGGTGCGCCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGG 4842 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || |||||||| | || || |||||| | || | ||| ||| ||| Sbjct 4843 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCC 4902 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 || || | ||| |||||||| || || ||||| || || Sbjct 4903 ACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTTTTCAC 4940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325363647019337