Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq56282 104 3e-17 >seq56282 Length=20701 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 104904 AGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGA 104963 ||||||| || ||||| || ||||| |||||||||||||||||| | || || | |||| Sbjct 12030 AGTCTCAGACAGAGACAGGCACACCGTACATGCTTTACAAAGACTCTTGCAATCGGAAGA 11971 Query 104964 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAAT 105023 | |||||| |||| ||||| ||||| | ||| || ||||||||||| |||| | Sbjct 11970 GCAATCAACAGAACTTGGGGACCATCAAATGCAGCAACCTGTGTACAGAAATAGTGGAGT 11911 Query 105024 TTACAGACAAAGATGAG 105040 ||| |||||||||| Sbjct 11910 ATACCAGCAAAGATGAG 11894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582656228308520