Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq14992 127 2e-24 >seq14992 Length=4940 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || || || || || |||||||| || || || ||||| ||| | |||| | ||||| Sbjct 4940 GTGAAAACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATTGAG 4881 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||||| || || ||||||||||| || ||||| || || |||||| | || || Sbjct 4880 AACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGCAGAGGCTGATC 4821 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| ||||| || ||||||| || ||| | | ||||| || |||| |||||| Sbjct 4820 TTCGCTGGCAAGCAGCTGGAGGATGGGCGCACCTTGTCCGACTACAACATCCAGAAGGAA 4761 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || | || |||| || | ||||| Sbjct 4760 TCCACCCTGCACTTGGTGCTGCGCCTGAGGGGTGG 4726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569719251883760