Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Podiceps_20cristatus_20[genbank_20GCA_5F000699545.1_202014-06-11] 82,923 sequences; 1,134,922,578 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq54308 98.7 1e-15 >seq54308 Length=15023 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | ||| |||||||| || | || ||||||||||||| ||| || Sbjct 12088 TCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGCCCAGGCATTAATCCTCTTTTCTTC 12147 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| |||| ||||| || || |||||||| || || || || || ||||| || Sbjct 12148 AGCCAAAAAATTGATGCAAAGGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 12207 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 12208 ACTACACGT 12216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520947458132200