Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_002229.3 Length=177874 Score E Sequences producing significant alignments: (Bits) Value seq23 120 3e-22 >seq23 Length=11595592 Score = 120 bits (132), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 20/206 (10%) Strand=Plus/Plus Query 1930 AGGCCGCGGTCGGCCGGCACC-CGCCATTGCCGCCGCGAAGAGTTCGCCTCTGTCAGCCT 1988 |||||||||||||| ||| | |||| | ||||||||||||||||| |||||||||||| Sbjct 7721426 AGGCCGCGGTCGGCAGGCTCAGCGCCGCTACCGCCGCGAAGAGTTCGTCTCTGTCAGCCT 7721485 Query 1989 CGGCGGCGCCCGGG-----AGATGCGgc-----------gcgcggccccgcgcccccagc 2032 |||||||| ||||| || |||| | || ||| | | ||||||| Sbjct 7721486 CGGCGGCGGCCGGGACCAAAGGGCCGGCCCGCCCACCCTGGGCAGCCGGGGGACCCCAGC 7721545 Query 2033 agagcaacacgggagcggcgcccccggg-gc--aacccccgcgccccccTGCGCCGTGGG 2089 ||||||| ||||| |||||||| ||||| || | | ||||| | ||||| ||||| Sbjct 7721546 AGAGCAAAACGGGCGCGGCGCCGCCGGGCGCTGAGCAGCCGCGGCTCCCTGAAACGTGGA 7721605 Query 2090 GCGCGCGGACGGCGTCGCTCCCACAC 2115 | |||||| |||| ||| || |||| Sbjct 7721606 GTGCGCGGTGGGCGCCGCCCCGACAC 7721631 Score = 120 bits (132), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 20/206 (10%) Strand=Plus/Minus Query 139505 GTGTGGGAGCGACGCCGTCCGCGCGCCCCACGGCGCAggggggcgcgggggtt--gc-cc 139561 |||| || ||| |||| |||||| | ||||| ||||| | ||||| | | || || Sbjct 7721631 GTGTCGGGGCGGCGCCCACCGCGCACTCCACGTTTCAGGGAGCCGCGGCTGCTCAGCGCC 7721572 Query 139562 cgggggcgccgctcccgtgttgctctgctgggggcgcggggccgcgc-----------gc 139610 ||| |||||||| ||||| |||||||||||||| | | ||| || | || Sbjct 7721571 CGGCGGCGCCGCGCCCGTTTTGCTCTGCTGGGGTCCCCCGGCTGCCCAGGGTGGGCGGGC 7721512 Query 139611 CGCATCT-----CCCGGGCGCCGCCGAGGCTGACAGAGGCGAACTCTTCGCGGCGGCAAT 139665 || || ||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct 7721511 CGGCCCTTTGGTCCCGGCCGCCGCCGAGGCTGACAGAGACGAACTCTTCGCGGCGGTAGC 7721452 Query 139666 GGCG-GGTGCCGGCCGACCGCGGCCT 139690 |||| | ||| |||||||||||||| Sbjct 7721451 GGCGCTGAGCCTGCCGACCGCGGCCT 7721426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569030345175840