Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq32 98.7 1e-15 >seq32 Length=7345140 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/106 (82%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 95105 CCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCT 95164 |||||||||| || |||||||| || |||||||| |||||||||||||| |||| |||| Sbjct 6865286 CCCCCATGCCAACAGCCTCCACTGCCCAGATCCTGGGCAACAACGAGTCCATCGAGCCCT 6865227 Query 95165 TCACCTCCAACGTGTACAACAGGC-GGGTGCTCGCCGGGGAATTCC 95209 |||| |||| | ||| ||| || |||||||| | ||||| |||| Sbjct 6865226 ACACCAGCAACATCTAC-ACACGCAGGGTGCTCTCGGGGGAGTTCC 6865182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494689769079760