Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq48 95.1 5e-14 >seq48 Length=4916287 Score = 95.1 bits (104), Expect = 5e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| |||||||| | ||||| || || |||||||| || | || || || ||||| Sbjct 3713843 GTTACCAATGCAGTAGTGACTGTCCCAGCCTATTTCAACGACTCCCAGCGCCAGGCAACG 3713902 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| |||||| || | || || || ||||| || || || || |||||| Sbjct 3713903 AAAGATGCTGGAACTATTGCAGGGCTCAACGTGCTGCGAATCATCAACGAGCCCACAGCA 3713962 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| | || ||||| || Sbjct 3713963 GCTGCCATTGCCTATGGGCT 3713982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975581553099848