Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 9e-13 >seq12 Length=17335395 Score = 89.7 bits (98), Expect = 9e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 39167 TTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGC 39226 ||||||| |||||| | ||| |||||||||||||| || || |||||||| |||||||| Sbjct 8985337 TTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTCAGCCAAAAAATTGATGC 8985396 Query 39227 AAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273 |||| | ||| ||||| || || ||||| ||||| |||| || Sbjct 8985397 AAAAGAGCCAGAGAAGAAGATGCCTTCCACTGCTGCAAAGGCTACTA 8985443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905074835434800