Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq182 93.3 1e-13 >seq182 Length=329078 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || |||| |||||||| || |||||||| | ||| Sbjct 207799 GTCTTCACGGCGGTGTCGATGAGGCCCTCACGGCCACCCATGGCGTGGAAGAAGAACTCG 207858 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 || || || | | ||||| |||| ||||| || || |||||| | | Sbjct 207859 GTGGGGGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGGCCGTAG 207918 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| |||| || || ||||| | ||||| ||||| || Sbjct 207919 TCGTCCTTGATGAAGTGCGGCAGCGTCCGGTGCTTGAAGCCGAACGGGATCCGCTTGCCC 207978 Query 302800 TCAACGTTCTGCTGTCCCA 302818 || |||||||||||||||| Sbjct 207979 TCCACGTTCTGCTGTCCCA 207997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471715655473822