Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopodoces_20humilis_20[refseq_20GCF_5F000331425.1_202013-01-11] 5,406 sequences; 1,042,997,632 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq95 87.8 2e-12 >seq95 Length=1820170 Score = 87.8 bits (96), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 146449 GACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTACCA 146508 |||||||||||| || || ||| | |||||||||||||| || || | | ||| | | Sbjct 820590 GACCATCATTAACTTGGCTCAGAACTTTGTGGGCAGCAACAACCTCAACTTGCTCCAGCC 820531 Query 146509 GATGGG-CAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATAT 146567 || || || || || |||||| || | |||||||||||| |||| || || |||| || Sbjct 820530 CATTGGTCAGTTTGGCACAAGGCTGCATGGAGGGAAGGACTCTGCCAGCCCTCGATACAT 820471 Query 146568 TTTCACCA 146575 ||||||| Sbjct 820470 CTTCACCA 820463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521510356556080