Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq52641 105 1e-18 >seq52641 Length=258 Score = 105 bits (116), Expect = 1e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||||||||| || ||||| || |||||||| || || Sbjct 257 CTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCATCCGGCGCCTGGCTCGGCGCGGC 198 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||||| | || || || |||| || |||| || | || ||||| | ||| Sbjct 197 GGCGTGAAGCGCATTTCGGGGCTGATCTACGAGGAGACGCGCGGCGTGCTGAAGGTGTTC 138 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| |||| || || || ||| || |||||||| || | ||||| || Sbjct 137 CTGGAGAACGTGATCCGCGACGCCGTCACCTACACGGAGCACGCCAAGAGGAAGACGGTG 78 Query 16634 ACCTCCATGGA 16644 || ||||||| Sbjct 77 ACGGCCATGGA 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79021615209651