Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09]
58,607 sequences; 1,069,324,295 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq15821 87.8 2e-12
>seq15821
Length=35697
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | ||||| || || | ||||| || | |||||| |||| | || |
Sbjct 254 CAACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCC 313
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
| |||||||| ||| | || || ||||| ||||| ||||| || || || ||
Sbjct 314 CAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 373
Query 26885 TCAACAAAGACT-CATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACT 26943
||| || || || || || || ||||| || || ||||||| | | | | | ||||
Sbjct 374 TCAGCAGAGGCTGCACTT-CGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACT 432
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| ||||| ||||||||||| || | || || |||||| | || || || ||
Sbjct 433 ACAACATCCAAAAAGAATCCACCCTGCACCTTGTCCTGCGCCTGAGGGGGGG 484
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | || || || | |||||| |||| | || | |
Sbjct 714 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 773
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | || || ||||| ||||| ||||| || || || |||||
Sbjct 774 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 833
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | || ||||| || || ||||||| | | | | | |||||| |||
Sbjct 834 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 893
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981
|| ||||||||||| || | || || ||||||
Sbjct 894 ATCCAAAAAGAATCCACCCTGCACCTTGTCCTG 926
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478311737909040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |