Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09]
58,607 sequences; 1,069,324,295 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq15821 98.7 9e-16
>seq15821
Length=35697
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | || || || | || ||| |||| || ||| |||
Sbjct 714 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 773
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| ||| | || || ||||| ||||| |||||||| || || |||||
Sbjct 774 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 833
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| ||||| | || |||||||| || ||||||| | | | | ||| || |||
Sbjct 834 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 893
Query 24171 ATTCAAAAAGAATCTAC 24187
|| ||||||||||| ||
Sbjct 894 ATCCAAAAAGAATCCAC 910
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||| ||||| | ||||| || || | ||||| || | || ||| |||| || ||| |
Sbjct 254 CAACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTGGAGCC 313
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|| |||||||| ||| | || || ||||| ||||| |||||||| || || ||
Sbjct 314 CAGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 373
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
||| ||||| ||| | || |||||||| || ||||||| | | | | || ||
Sbjct 374 TCAGCAGAGGCTGCACTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCTGACTA 433
Query 24167 TAACATTCAAAAAGAATCTAC 24187
||||| ||||||||||| ||
Sbjct 434 CAACATCCAAAAAGAATCCAC 454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429628908404085
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |