Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq15821 95.1 1e-14 >seq15821 Length=35697 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || |||||||||| ||||| ||| | || ||| ||||| Sbjct 714 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGT 773 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || || || ||||| |||||| ||||| ||||| Sbjct 774 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAG 833 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || ||||| || | || ||||| || |||||||| | || || |||| || || Sbjct 834 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 893 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||| || || || | || |||| ||||| ||||| Sbjct 894 ATCCAAAAAGAATCCACCCTGCACCTTGTCCTGCGCCTGCGGGGTGG 940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422737834029400