Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq37518 93.3 8e-14 seq13427 93.3 8e-14 seq26687 84.2 4e-11 >seq37518 Length=11320 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765 ||||| ||| | |||| |||| || || || || ||||| || |||||||||||||| Sbjct 9636 ACCTCATCCTTGCTGGTATACTCCACTATTTCTGTACAGAGATTGCTGCACTTGATGGTC 9577 Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATG 244816 ||||||| ||| |||||| ||| |||||| | ||| |||||||||||| Sbjct 9576 CCCAGGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATG 9526 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067 || ||||||||| || || ||||||||||| ||||||||| || | | |||||| || Sbjct 8272 CTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAGAGGTCTCTAGCTCGCTGCTCTTC 8213 Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127 |||||||||||| ||| || | ||| ||||||| ||| | ||||| ||||||| Sbjct 8212 TTTCCCAGTGTTCTTCTTCAAGTCAAGAAATTCAAAGATGTCCAAATGCCACGGCTCCAG 8153 Query 245128 GTAGA 245132 |||| Sbjct 8152 ATAGA 8148 >seq13427 Length=23672 Score = 93.3 bits (102), Expect = 8e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| |||| |||||| | || || || ||||||||||| ||||| |||| || Sbjct 10417 GGTGAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 10476 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 | || || ||||| ||| ||| || |||||| ||||| || ||||| || ||||| Sbjct 10477 GCTATATTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTT 10536 Query 42816 ATCAGCAGGGACGAGG 42831 || ||||| || |||| Sbjct 10537 ATTAGCAGAGATGAGG 10552 >seq26687 Length=16082 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 |||||||||||||| || || || ||||| ||||| ||| ||| || ||||||||| Sbjct 2179 ACCTGAAACTCTCCGGAGAGGACTCGGCGTGTGTAGATGTTACTGGTGTAGGGCTCGATG 2120 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 || | ||||||| ||||| || || ||||| |||||||| || | || || Sbjct 2119 GATTCGTTATTGCCCAAGATCTGAGCGGTAGAAGCAGTTGGCATGGGAGAAAGGAGAAGG 2060 Query 244217 CTGTTCCTCACGCCGT 244232 ||||| || ||||||| Sbjct 2059 CTGTTTCTGACGCCGT 2044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943647388906320