Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5826 89.7 5e-13 seq37518 87.8 2e-12 >seq5826 Length=5185 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| | ||||| || || || | | | || ||||| || ||||||||||| Sbjct 4575 GCCCCCTCTGAGACGCAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGA 4634 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || ||| ||| || || || || || | | |||| || | ||| ||||| || || Sbjct 4635 CAAGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGG 4694 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | | || | |||||| | | |||||| Sbjct 4695 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCAC 4754 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || ||||| || || || ||||| ||||||||| Sbjct 4755 CTCCAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 4803 >seq37518 Length=11320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 153642 TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTG 153701 |||| ||| || || | ||||| |||||||| || ||| |||| || ||||||||| Sbjct 9618 TACTCCACTATTTCTGTACAGAGATTGCTGCACTTGATGGTCCCCAGGTTCTGCTGATTG 9559 Query 153702 CTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 153761 || || || ||||| | ||||||| |||||||||||||| ||| || || |||| | Sbjct 9558 CTCTTCCGGTTGCAAGAGTCTTTGTAGAGCATGTACGGTGTGCCCGTTTCCGTCTGCGAT 9499 Query 153762 TCGACGAT 153769 || | ||| Sbjct 9498 TCAATGAT 9491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495898844369040