Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq37518 104 4e-17 >seq37518 Length=11320 Score = 104 bits (114), Expect = 4e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 221732 ACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTC 221791 ||||| |||||| ||||||||| | || ||||||||||| |||||||||||||||||| Sbjct 9636 ACCTCATCCTTGCTGGTATACTCCACTATTTCTGTACAGAGATTGCTGCACTTGATGGTC 9577 Query 221792 CCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841 ||||||| | ||||| ||| || ||| || ||| ||||||||||| Sbjct 9576 CCCAGGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTAGAGCAT 9527 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 222019 CTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATC 222078 || |||| || || | || ||||||||| || || ||||| || || ||||| || Sbjct 8290 CTGGTTGGTTTCAACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAGAGGTC 8231 Query 222079 TCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTC 222138 ||| | |||||||| || || |||| ||| ||| || | ||| ||||| ||||| Sbjct 8230 TCTAGCTCGCTGCTCTTCTTTCCCAGTGTTCTTCTTCAAGTCAAGAAATTCAAAGATGTC 8171 Query 222139 AGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||||||||||||||||| ||| | ||| || |||| || Sbjct 8170 CAAATGCCACGGCTCCAGATAGATGGCAAAAGCCCCAGGTCTCT 8127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928164339910080