Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq40891 104 4e-17 >seq40891 Length=31075 Score = 104 bits (114), Expect = 4e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39167 TTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGC 39226 ||| ||| |||||| | ||| ||||||||||||||||| || |||||||| |||||||| Sbjct 3142 TTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCTTCTTCAGCCAAAAAATTGATGC 3083 Query 39227 AAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273 |||| || |||||||||||| || ||||| ||||| |||| || Sbjct 3082 AAAAGAACCAGAAAAGAATATTCCTTCCACTGCTGCAAAAGCTACTA 3036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904472908680600