Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9231 89.7 2e-12 >seq9231 Length=1004 Score = 89.7 bits (98), Expect = 2e-12 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || || || | || || ||||| || |||||||| | ||| Sbjct 1004 GTCTTGACGGCGGTGTCGATGAGCCCCTCGCGGCCGCCCATGGCGTGGAAGAAGAACTCG 945 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 || || || | | ||||| |||| ||||| || || ||||||| | | Sbjct 944 GTGGGGGTGAGGCCGGCCAGGTAGGAGTTCTCCACGAAGCCGCGGCTCTCGGGCCCGTAG 885 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 ||| |||| | ||||| ||||| |||| || || ||||| | ||||| ||||| || Sbjct 884 TCGTCCTTGATGAAGTGGGGCAGCGTCCGGTGCTTGAAGCCGAAGGGGATGCGCTTGCCC 825 Query 302800 TCAACGTTCTGCTGTCCCA 302818 |||||||||||||| |||| Sbjct 824 TCAACGTTCTGCTGACCCA 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470712408944559