Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq40754 105 6e-18 >seq40754 Length=65144 Score = 105 bits (116), Expect = 6e-18 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || |||||| ||||| | |||||| |||| | ||| ||||| Sbjct 6197 AGCATATGGGGACCAACATGTGATGGCCTAGATCGTATTGTTGAGCGTTTTGATATGCCA 6256 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||| | ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 6257 GAGTTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 6315 Query 21245 T-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 | |||| || || || || |||| | |||| || |||||||| || ||| Sbjct 6316 TGCTTCTACTTTCAATGGATTCCAGAGGCCACCAATACACTATGTAATGTCA 6367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463206012287760