Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pterocles_20gutturalis_20[refseq_20GCF_5F000699245.1_202014-06-09] 58,607 sequences; 1,069,324,295 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq30356 221 4e-52 seq46232 190 6e-43 seq5826 150 5e-31 seq15821 140 1e-27 seq40891 93.3 1e-13 seq39577 89.7 2e-12 seq28996 89.7 2e-12 >seq30356 Length=2418 Score = 221 bits (244), Expect = 4e-52 Identities = 581/878 (66%), Gaps = 18/878 (2%) Strand=Plus/Plus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| |||||||| || ||| | || | ||| |||| || || || Sbjct 472 AAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAAGTGCAGAATGCCGTCATCACA 531 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || || || || ||||| ||||||| || || ||||||||||| | ||| | Sbjct 532 GTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGTACCATCACT 591 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | ||||| | | || || || || ||||| ||||| || || || ||||| | Sbjct 592 GGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGCTGCTGCTATAGCCTATGGCTTG 651 Query 349742 GATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || || | || || ||| || || | || || ||||| || || || || Sbjct 652 GACAAGAAAGGTACCCGGGCTGGAGAGAAGAACGTGCTCATCTTTGACTTGGGAGGGGGC 711 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 ||||||||||| || | || || |||| || || || ||||| || || | || ||| Sbjct 712 ACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCACAGCT 771 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915 ||||| || ||||| ||||| || || ||||| || || | || |||||||| || Sbjct 772 GGTGACACCCATCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTGTGGAA 831 Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 ||||| |||||| |||| || ||| |||| | || ||||| || | || || Sbjct 832 GAATTCAAGCGT-AAGCACAAGCGTGACATTGCTGGCAACAAGCGAGCAGTGAGGCGACT 890 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAACCTCTATTG 350033 |||| || ||||| | || ||||| | || | | ||| | || ||| | |||| Sbjct 891 GCGAACGGCTTGTGAGAGAGCAAAGCGCACTCTGAGC-TCTTCCACACAAGCTAGCATTG 949 Query 350034 AAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093 | ||||| ||||| || |||| || |||| | || ||||| ||||| || |||| Sbjct 950 AGATTGACTCTCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGCTTTG 1009 Query 350094 AAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAG 350153 | || | | ||||| || | | || |||| || ||||| || | | | Sbjct 1010 AGGAGCTCAATGCTGATCTCTTCCGTGGCACCTTGGAGCCCGTGGAGAAGGCCCTGCGTG 1069 Query 350154 ATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 |||| || | ||| ||||| | || | || | || ||||| ||||| |||| Sbjct 1070 ATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGTGGCTCTACCCGTA 1129 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCA 350272 | || || | ||| || | ||| || || || ||||||||||||| | | ||| | Sbjct 1130 TCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAACTCAACAAGAGC- 1188 Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGA 350332 || || || ||||| |||||||| |||||||||||||| || ||| |||| | ||| Sbjct 1189 ATCAACCCCGATGAGGCTGTTGCTTATGGTGCTGCTGTGCAAGCAGCTATCCTCATGGGA 1248 Query 350333 AATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTT 350389 | ||| ||| | | || | ||||| | || | ||||| || || || || || Sbjct 1249 GACAAG---TCTGAGAATGTGCAGGATCTGCTCCTGTTGGATGTCACCCCTCTGTCCCTG 1305 Query 350390 GGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 || | || || |||||| ||| ||||||| ||| || Sbjct 1306 GGCATTGAGACAGCTGGTGGAGTGATGACTGCTCTCAT 1343 >seq46232 Length=24660 Score = 190 bits (210), Expect = 6e-43 Identities = 376/549 (68%), Gaps = 8/549 (1%) Strand=Plus/Minus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| ||||||| || || | || ||||| || |||||||| ||| | | || Sbjct 23457 GAAAGGAATGTTCTTATCTTCGACCTTGGAGGTGGCACCTTTGATGTGTCAATTTTGACT 23398 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| || || ||||| || ||| | ||||| ||||| || || | ||||||||| Sbjct 23397 ATTGAAGATGGCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAA 23338 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938 || ||||| || || | || || || || ||||| ||||| ||||| || | Sbjct 23337 GACTTTGACAACCGCATGGTCAACCACTTCATTGCTGAATTCAAGCG-CAAGCACAAGAA 23279 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || |||||| | |||||||| | ||||| || || ||||| || Sbjct 23278 AGACATCAGTGAGAACAAGAGAGCAGTTCGTCGCCTCCGCACTGCATGCGAGCGTGCAAA 23219 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 |||| | | ||||| | || || || |||||||||||||||||| ||| || | Sbjct 23218 GCGTACTCTGTCATCCAGCACGCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGTAT 23159 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 || |||| |||| ||||| | ||||| || ||||| || ||| || || || Sbjct 23158 TGACTTCTACACATCCATTACCAGAGCTCGCTTCGAAGA--GCTGAATGCTGACCTCTTC 23101 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 | | || ||||||| |||||||| | | ||||| ||| | |||| ||| Sbjct 23100 CGCGGCACCCTGGATCCGGTGGAAAAGGCCCTGCGGGATGCCAAACTAGACAAATCGCAG 23041 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||| | || | |||||||| ||||| || || ||||| |||| | | || Sbjct 23040 ATCCATGACATCGTGCTGGTTGGTGGGTCTACTCGCATCCCAAAGATTCAGAAACTGCTG 22981 Query 350237 TCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGC 350295 || || || ||||||||||| | | ||| | || ||||| ||||||||||| || Sbjct 22980 CAGGACTTCTTCAATGGCAAAGAGCTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGC 22922 Query 350296 ATATGGTGC 350304 || ||||| Sbjct 22921 TTACGGTGC 22913 Score = 134 bits (148), Expect = 4e-26 Identities = 346/522 (66%), Gaps = 4/522 (1%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT-TCTTTGCCATTA 183320 ||||||| || || ||||||||||| || || || | | | | | ||||||||||| Sbjct 22911 CTGCACCGTAAGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAGCTCTTTGCCATTG 22969 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || |||| || ||||| ||||| || | ||| || ||||| || | || Sbjct 22970 AAGAAGTCCTGCAGCAGTTTCTGAATCTTTGGGATGCGAGTAGACCCACCAACCAGCACG 23029 Query 183381 ACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439 | |||| ||| | ||| ||| |||| | ||| | | ||||| || || || Sbjct 23030 ATGTCATGGATCTGCGATTTGTCTAGTTTG-GCATCCCGCAGGGCCTTTTCCACCGGATC 23088 Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499 || || | || | || | | |||||| || | ||||| || | |||| Sbjct 23089 CAGGGTGCCGCGGAAGAGGTCAGCATTCAGCTCTTCGAAGCGAGCTCTGGTAATGGATGT 23148 Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGA 183559 | ||||||||||| | ||| | |||||||||||||| | || || ||||| Sbjct 23149 GTAGAAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTGGATGA 23208 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 | || | || || || || ||||| || | || ||||| | || ||| || || Sbjct 23209 CAGAGTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTC 23268 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 | || |||| || || || | || ||||||| ||| || || | | | | | Sbjct 23269 ACTGATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT 23328 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 ||||| ||||| ||||| || || || || || ||||| | ||| || ||||| || || Sbjct 23329 GTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCC 23388 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACC 183781 ||||||||| | |||||||| |||||||| || ||||| || Sbjct 23389 ATCTTCAATAGTCAAAATTGACACATCAAAGGTGCCACCTCC 23430 Score = 114 bits (126), Expect = 4e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| |||| || | ||||||||||||||||| |||||| | |||||| || Sbjct 23713 ACTGTTACTAATGCGGTAGTAACTGTACCAGCCTATTTCAATGATTCTCAGCGTCAGGCT 23654 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 |||||||||||||| | ||||| ||| | |||||||| |||| || || || || || Sbjct 23653 ACAAAAGATGCTGGAACTATTGCAGGGCTCAATGTTCTGCGAATTATCAACGAGCCAACA 23594 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 ||||| || || || ||||| || || |||| Sbjct 23593 GCTGCTGCGATAGCCTATGGTCTGGACAAAA 23563 Score = 87.8 bits (96), Expect = 5e-12 Identities = 115/156 (74%), Gaps = 5/156 (3%) Strand=Plus/Minus Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || |||||| | || || | ||||| ||||| || || || | || | ||||| Sbjct 23974 CAGTCTGATATGAAGCACTGGCCTTTCACTGTGGTG---AATGATGCTGGCAGACCAAAA 23918 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAAT 349551 | |||| || || ||||| || | ||| | ||| ||||| ||||||||||| || || Sbjct 23917 GTCCAGGTGGAGTACAAAGGCGAG-ACAAAGAGTTTCTACCCAGAAGAAATTTCTTCCAT 23859 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATA 349587 ||||||| ||||||||||||||||| |||||||| Sbjct 23858 GGTTTTAACCAAAATGAAGGAAATTGCAGAAGCATA 23823 >seq5826 Length=5185 Score = 150 bits (166), Expect = 5e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 140535 TGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGT 140594 || || || ||||| || || || || || ||||| | || ||||||||||| || || Sbjct 4372 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 4431 Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||| ||||| || | |||||||| |||||||| ||||| || ||||| || ||| Sbjct 4432 TTGCCAGCGAAGATGAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGATCTTA 4491 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | ||| || |||||||| || || | |||||| ||||| Sbjct 4492 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCGGTC 4551 Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737 || || || ||||| |||||||| Sbjct 4552 AGGGTCTTCACAAAGATCTGCAT 4574 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || || || || || || ||||| | || ||||||||||| | Sbjct 4824 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCA 4882 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||| ||||| || | |||||||| |||||||| ||||| || ||||| | Sbjct 4883 GCTGCTTGCCAGCGAAGATGAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGGA 4942 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | ||||| || ||||| ||||| | ||| || || || || || || | ||||| | Sbjct 4943 TCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGC 5002 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || ||||||||| Sbjct 5003 CAGTCAGGGTCTTCACGAAGATCTGCATT 5031 Score = 123 bits (136), Expect = 8e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || || || || || || ||||| || || ||||| ||||| | Sbjct 4596 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAAGGTGCGCCCGTCTTCCA 4654 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| || | ||||| ||||| ||||| ||||| || ||||| | Sbjct 4655 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGA 4714 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | ||| || || || || || || | ||||| | Sbjct 4715 TCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGC 4774 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || ||||| |||||||| Sbjct 4775 CAGTTAGGGTCTTCACAAAGATCTGCAT 4802 >seq15821 Length=35697 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || ||||| || || || || || || || || || ||||| | || || |||||| Sbjct 697 AGCACGAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCT 638 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || |||||||| || || | ||||||||||| ||||| ||||| || ||| Sbjct 637 TCCAGCTGCTTGCCAGCAAAAATAAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 578 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || || |||||||| || | ||| Sbjct 577 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTC 518 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || |||||||||||||| Sbjct 517 TTCCCAGTCAGGGTCTTCACAAAAATCTGCAT 486 Score = 136 bits (150), Expect = 1e-26 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||| || | | || ||||| || || || || |||||||| || || || || || Sbjct 941 ACCACCCCGCAGGCGCAGGACAAGGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 882 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || |||||||| || || || ||||| ||||| || | ||||||||||| || Sbjct 881 CAGGGTGCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCAGGGGG 822 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| ||||| || ||||| || || || || ||||| ||||| | ||| || || || Sbjct 821 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 762 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 761 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 714 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || ||||| || || || || |||||||| || || || ||||| | || || |||||| Sbjct 469 AGGACAAGGTGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATCT 410 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||| ||| || | ||||||||||| ||||| ||||| || ||| Sbjct 409 TCCAGCTGCTTGCCAGCGAAGTGCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 350 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || || || || || || | ||| Sbjct 349 TGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 290 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 289 TTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 258 >seq40891 Length=31075 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 223719 ATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCT 223778 || |||||||||| || | ||| || ||||| || | |||||||||||| ||||||| Sbjct 3164 ATACCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCT 3105 Query 223779 TTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAA 223838 | |||| |||||| |||| ||||| || ||||| ||||| ||||| || |||| Sbjct 3104 TCTTCAGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAATATTCCTTCCACTGCTGCAA 3045 Query 223839 ACGCTACTA 223847 | ||||||| Sbjct 3044 AAGCTACTA 3036 >seq39577 Length=5739 Score = 89.7 bits (98), Expect = 2e-12 Identities = 124/173 (72%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || ||||| ||||| | || || ||| || || || || || || Sbjct 4584 ACGGCTGCTGCCATTGCTTATGGATTGGACAA---GAGGGAGGGTGAGAAGAACATCCTC 4528 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| | || ||||| ||||||||||| || || || ||| |||| | ||| | Sbjct 4527 GTGTTTGACCTGGGCGGTGGAACTTTTGATGTCTCCCTCCTCACAATTGACAATGGAGTC 4468 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || ||| |||||| || || || ||||||||||| ||||| Sbjct 4467 TTTGAAGTTGTGGCTACTAATGGTGACACTCACCTGGGTGGAGAAGACTTTGA 4415 Score = 86.0 bits (94), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 ||||| || | ||| | |||||||| ||||| || || || ||| | || || | | Sbjct 3822 ATTGACGAGATTGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTTGTC 3763 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || ||||| |||||||||||| | ||||||||||| || ||||| || Sbjct 3762 AAAGAGTTCTTCAATGGGAAAGAACCTTCTCGTGGCATTAATCCAGACGAGGCTGTAGCC 3703 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 || ||||| ||||| ||||| Sbjct 3702 TACGGTGCGGCTGTCCAGGC 3683 >seq28996 Length=13643 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||||||||| || ||||| | || || |||||||| || || || |||||||| | Sbjct 13062 CTTTTTGAATATTGTAGTCAGACAGCGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 13121 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || ||||||||||||||||| ||| Sbjct 13122 TCAGTCGCTGCTGATCAGGAGGAATGCCT 13150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514116592156421