Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq19211 84.2 3e-11 seq18321 82.4 9e-11 >seq19211 Length=6011973 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || ||||||||||||||||| |||||||| || || || ||||||||||| Sbjct 3085152 ATATTCACCTACTCGCTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 3085211 Query 117045 AAAGTCAAATGGATTCTTCGCGTT 117068 |||||||| ||||||| ||| || Sbjct 3085212 GAAGTCAAAAGGATTCTCCGCTTT 3085235 >seq18321 Length=7501628 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 |||| |||| | |||||||||||| ||||| || || ||||| || |||| ||||| Sbjct 4158971 CCTCGTCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 4159030 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||| |||| | ||||| ||| || || || ||||||||||| || || || ||||| Sbjct 4159031 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAGAAGAAGATGCCTTCAACTGCAGCAAAG 4159089 Query 117412 GCAA 117415 |||| Sbjct 4159090 GCAA 4159093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589838725248600