Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq17757 82.4 4e-11 >seq17757 Length=370366 Score = 82.4 bits (90), Expect = 4e-11 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 |||||| || ||| || | ||| |||||||| | ||| | || | ||||| |||| | Sbjct 343399 TCAACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGC 343458 Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAA-TCAAAAATATCTGAGTGCC 26039 ||||||||||| ||| ||||| |||| || |||||| ||||| || || | |||| Sbjct 343459 TGCTCTTCTTTTCCAGTG-TTCTTCTTTAAGTC-AAGAAACTCAAAGATGTCCAAATGCC 343516 Query 26040 ATGGTTCTAAATAGATAGCAAAA 26062 ||||||| | ||||| |||||| Sbjct 343517 ATGGTTCCAGGTAGATGGCAAAA 343539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252980588184875