Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06]
19,265 sequences; 1,216,617,519 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq17599 179 5e-39
seq18618 167 3e-35
seq18952 91.5 2e-12
>seq17599
Length=3454605
Score = 179 bits (198), Expect = 5e-39
Identities = 161/202 (80%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3116752 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3116811
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3116812 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3116871
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||||||||| |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3116872 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3116931
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3116932 GCACCTGCTTCAGCACCTTGTA 3116953
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3132469 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3132410
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3132409 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3132350
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3132349 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3132290
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3132289 GCACCTGCTTCAGCACCTTGTA 3132268
Score = 176 bits (194), Expect = 5e-38
Identities = 160/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3203888 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3203947
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3203948 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3204007
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3204008 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3204067
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3204068 GCACCTGCTTCAGCACCTTGTA 3204089
Score = 170 bits (188), Expect = 2e-36
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3111957 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3111898
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3111897 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3111838
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3111837 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCTGTGTCGGGGT 3111778
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3111777 GCACCTGCTTCAGCACCTTGTA 3111756
Score = 170 bits (188), Expect = 2e-36
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3133641 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3133700
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3133701 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3133760
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3133761 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGGCAAGATGCCCGTGTCGGGGT 3133820
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3133821 GCACCTGCTTCAGCACCTTGTA 3133842
Score = 170 bits (188), Expect = 2e-36
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3142706 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3142765
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| ||||||| |||| |
Sbjct 3142766 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCAGCGATGCGCTCGAAGA 3142825
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3142826 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3142885
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3142886 GCACCTGCTTCAGCACCTTGTA 3142907
Score = 170 bits (188), Expect = 2e-36
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 3224393 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 3224452
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3224453 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3224512
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 3224513 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGGCAAGATGCCCGTGTCGGGGT 3224572
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3224573 GCACCTGCTTCAGCACCTTGTA 3224594
Score = 170 bits (188), Expect = 2e-36
Identities = 159/202 (79%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | || ||||| || ||||||||||| |||| | ||
Sbjct 3257345 GCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACAGCCGTCTGGATCTCCCGCGAGGTGA 3257286
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 3257285 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 3257226
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 3257225 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 3257166
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 3257165 GCACCTGCTTCAGCACCTTGTA 3257144
>seq18618
Length=1134
Score = 167 bits (184), Expect = 3e-35
Identities = 158/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | || |||||||| ||||||||||| |||| | ||
Sbjct 295 GCTTGGCCAGCTCACCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 354
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| |
Sbjct 355 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 414
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 415 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGGCAAGATGCCCGTGTCGGGGT 474
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 475 GCACCTGCTTCAGCACCTTGTA 496
>seq18952
Length=423184
Score = 91.5 bits (100), Expect = 2e-12
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| ||||| ||| | || | |||||| ||||| | |||||| || ||
Sbjct 154002 GCTTGGCCAGCTCGCCAGGCAGCAGGAGCCTCACGGCTGTCTGCACCTCGCGGCTGGTGA 153943
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||| | ||| | || ||||| || |||||| | | | | || || | |
Sbjct 153942 TGGTGGAGCGGTGGTTGTACTGGGCCAGGCGCGAGGCCTCTGAGGCCAGCCGCTCAAAGA 153883
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
| ||||||||||| |||||||||| ||| | ||| ||||||||| ||| ||||
Sbjct 153882 TATCGTTGACAAAGGAGTTCATGATGCTCATGGCCTTAGAGGAGATGCCAGTGTCTGGGT 153823
Query 1254523 GCACCTGC 1254530
||||||||
Sbjct 153822 GCACCTGC 153815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6105558223882005
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