Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygoscelis_20adeliae_20[refseq_20GCF_5F000699105.1_202014-06-06] 19,265 sequences; 1,216,617,519 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq18090 140 3e-28 seq18803 131 2e-25 seq17757 100 3e-16 >seq18090 Length=2644836 Score = 140 bits (154), Expect = 3e-28 Identities = 156/206 (76%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| | | | || || |||| Sbjct 433234 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCT 433292 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| ||||| || |||||||||||||| ||||| Sbjct 433293 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCT 433352 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| | Sbjct 433353 TGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCTAAGGTGATGGTCTTGCCTG 433412 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 433413 TCAGGGTCTTCACAAAGATCTGCATG 433438 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || |||| |||||| ||||| || |||||||| ||| Sbjct 433511 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCTTTG 433570 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| ||||| ||||||| || || | ||||| | Sbjct 433571 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATG 433630 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| || || ||||| |||||||| Sbjct 433631 GTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 433665 >seq18803 Length=1030202 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || || ||| | | | || || |||| Sbjct 327157 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 327215 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || || || |||||||||||||| ||||| Sbjct 327216 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCT 327275 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| | Sbjct 327276 TGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 327335 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 327336 TCAGGGTCTTCACAAAGATCTGCATG 327361 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || || ||| | | | || || |||| Sbjct 327385 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 327443 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || || || |||||||||||||| ||||| Sbjct 327444 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCT 327503 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| | Sbjct 327504 TGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 327563 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 327564 TCAGGGTCTTCACAAAGATCTGCATG 327589 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || || ||| | | | || || |||| Sbjct 327841 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 327899 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || || || |||||||||||||| ||||| Sbjct 327900 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCT 327959 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| | Sbjct 327960 TGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 328019 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 328020 TCAGGGTCTTCACAAAGATCTGCATG 328045 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| || || ||| | | | || || |||| Sbjct 328069 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 328127 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || |||| |||||| || || || |||||||||||||| ||||| Sbjct 328128 GCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCT 328187 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| | Sbjct 328188 TGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAG 328247 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 |||| || || || || ||||||||| Sbjct 328248 TCAGGGTCTTCACAAAGATCTGCATG 328273 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| || || ||| ||| || ||||| Sbjct 327613 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTG 327672 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| |||||| || || || |||||||||||||| |||||| Sbjct 327673 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 327732 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| ||||||| || |||| |||| ||| ||||| || Sbjct 327733 CGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTGCCAGT 327792 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || ||||||||| Sbjct 327793 CAGGGTCTTCACAAAGATCTGCATG 327817 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| || || ||| ||| || ||||| Sbjct 328297 ATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGCTG 328356 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| |||||| || || || |||||||||||||| |||||| Sbjct 328357 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 328416 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTC 133609 ||||| | ||||| ||||| ||||||| Sbjct 328417 GGCCTTGACATTCTCAATGGTGTCACTGGGCTC 328449 >seq17757 Length=370366 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 ||||| || || || | |||||||||||||||||||| |||| ||||| |||||| Sbjct 342053 TACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGATTG 342112 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||| | |||||| | ||| |||||||||||||||||| ||| || || Sbjct 342113 CTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTC 342162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483304386228600