Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= AC_000019.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq169466 118 2e-22 >seq169466 Length=306 Score = 118 bits (130), Expect = 2e-22 Identities = 198/284 (70%), Gaps = 2/284 (1%) Strand=Plus/Minus Query 14313 GAATGGAGTGCTTGAAAGTGACATT-GGTGTTAAGTTCGACACCAGGAACTTCAAGCTGG 14371 ||| || || || ||||| ||| | || || ||||| |||||| | ||||||| |||| Sbjct 295 GAACGGGGTTCTGGAAAGCGACNGTCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGG 236 Query 14372 GATGGGATCCCGAAACCAAGTTGATCATGCC-TGGAGTGTATACGTATGAAGCCTTCCAT 14430 | | || || | || | ||||||| | |||| ||||| | |||||||||||| Sbjct 235 GGTTTGACCCAGTCACTGGTCTTGTCATGCCCTAGAGTATATACAAACGAAGCCTTCCAT 176 Query 14431 CCTGACATTGTCTTACTGCCTGGCTGCGGAGTGGATTTTACCGAGAGTCGTTTGAGCAAC 14490 || ||||| | || ||||| | ||| ||||| || ||| | || || |||||||| Sbjct 175 CCAGACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAAC 116 Query 14491 CTTCTTGGTATCAGaaaaaaaCAGCCATTTCAAGAGGGTTTTAAGATTTTGTATGAAGAT 14550 | | || ||| | || || || || || ||||| |||| ||| || || || Sbjct 115 TTGTTGGGCATCCGCAAGCGGCAACCCTTCCAGGAGGGCTTTAGGATCACCTACGATGAC 56 Query 14551 TTAGAAGGTGGTAATATTCCGGCCCTCTTGGATGTAGATGCCTA 14594 | || |||||||| ||||| || || |||||||| || ||||| Sbjct 55 CTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGACGCCTA 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110817170396800