Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= AC_000020.1 Length=31323 Score E Sequences producing significant alignments: (Bits) Value seq169466 120 6e-23 >seq169466 Length=306 Score = 120 bits (132), Expect = 6e-23 Identities = 175/246 (71%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 13177 AAGTTTGACACCAGAAACTTTCACCTGGGCTTTGATCCCGAGACCAAGCTGGTCATG-CC 13235 |||||||||||| | ||||| ||||| ||||| || | || || |||||| || Sbjct 263 AAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCC 204 Query 13236 GGGCTTCTACACTAACGAGGCCTTCCACCCTGACATAGTGCTAAGTCCAGGCTGTGCGGT 13295 | | || || ||||| |||||||| || ||||| | | || | | ||| Sbjct 203 TAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGGT 144 Query 13296 GGACTTTACCCACAGCAGGCTCAACAACTTTTTAGGCATTAGAAAAAGGCTACCATACCA 13355 |||||| ||||||||| | || | |||||| || ||||| | || ||| ||| | ||| Sbjct 143 GGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTCCA 84 Query 13356 GGAGGGATTTGTGATTACCTGGGAGGACCTGCAGGGTGGCAACATTCCAGCCCTGTTAGA 13415 |||||| ||| ||| |||| || |||||| ||||||| |||||||| || ||||| || Sbjct 83 GGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGA 24 Query 13416 CCTGGA 13421 |||| Sbjct 23 TGTGGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99750120148000