Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= AC_000190.1 Length=33501 Score E Sequences producing significant alignments: (Bits) Value seq169466 140 7e-29 >seq169466 Length=306 Score = 140 bits (154), Expect = 7e-29 Identities = 208/292 (71%), Gaps = 5/292 (2%) Strand=Plus/Minus Query 12445 CGAGTAGGCAGAAACAACGGGGTGCCGGAAGAGGACA-TCGGGGTCAAATTTGATACGCG 12503 |||| |||||| ||| ||||| | |||| ||| ||||||| || ||||| || || Sbjct 306 CGAGCAGGCAGGAAC---GGGGTTCTGGAAAGCGACNGTCGGGGTAAAGTTTGACACCCG 250 Query 12504 CAACTTTCGCTTAGGTTGGGACCCAGAAACTAAGCTAGTGATGCCCG-GCTCGTACACGT 12562 |||||| | | || | ||||||| ||| || || |||||| | || || Sbjct 249 CAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCCTAGAGTATATACAA 190 Query 12563 ACGAGGCGTTCCATCCCGACATTGTCTTGCTGCCCGGCTGCGGCGTTGATTTTACCTACA 12622 |||| || |||||||| ||||| | |||||||| | ||| || || || ||| ||| Sbjct 189 ACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGGTGGACTTCACCCACA 130 Query 12623 GCCGCCTGAATAATTTGCTGGGAATACGCAAGAGACAGCCGTTCCAAGAAGGCTTTCGCA 12682 ||||||||| || ||| |||| || |||||| | || || ||||| || |||||| | | Sbjct 129 GCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTCCAGGAGGGCTTTAGGA 70 Query 12683 TTACTTATGATGATTTAAAGGGCGGCAACATTCCCGCGCTGCTAGACTTGGA 12734 | || || ||||| | |||| || ||||||||||| ||| | || |||| Sbjct 69 TCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGATGTGGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106694526786400