Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq57 122 6e-23 seq1 93.3 3e-14 >seq57 Length=2471119 Score = 122 bits (134), Expect = 6e-23 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || || ||||||| |||| |||||| ||| |||||||||| |||||||||||||| Sbjct 1904340 CTTGAGCTCTCTGCTGAGCACAATATTAATCCTGTCTTTTAAAGGACGGTTCTTCTCAGG 1904281 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 || |||||||| || ||||||||||| |||||| |||||||||| ||| Sbjct 1904280 GATGGAGAACCACGTTTTTTTACCCATTATCACTGCATTCTGTTTACCTG 1904231 >seq1 Length=88717973 Score = 93.3 bits (102), Expect = 3e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| |||||||||||||| || |||||||| ||||| | ||| || | Sbjct 42821910 CTTTGTATTCTGCTCCAAAATGCCTCCACTGGAAACCATACACTGGTCCCAAATCACCCT 42821969 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| ||||| | ||||| | || | || ||||| |||||||||| Sbjct 42821970 CCTCTCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGCGACCCATTAGCATCCCAAA 42822029 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || || || ||||||||| Sbjct 42822030 TCTTCACACCTTTAGCAGAGAGCTCTTTG 42822058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359911003204400