Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq16 163 3e-35 seq46 96.9 4e-15 >seq16 Length=17535700 Score = 163 bits (180), Expect = 3e-35 Identities = 189/255 (74%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | ||||||||||||||||||||| | ||| |||||||| Sbjct 6141748 GGGCACGCCGTCGGGGCCAATGAGGAACTTCTCGAAGTTCCAGGCGATGTCATTGCGGCA 6141689 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| ||||||| || Sbjct 6141688 GACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGACGAGGGGTCGTCGTGCGG 6141629 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 ||||| |||||| ||||||| |||||| || || || | ||||| ||||| Sbjct 6141628 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGAGGGTGCGCGTTCTTCCCGTTCACCTC 6141569 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | ||| ||||| |||| ||||||||| |||||||| ||||||| || Sbjct 6141568 GCACTTCTCGAACATCATGAAGTTGGGCTTGAAGCCGTTGCCAGGACGAACGTGCTCGAG 6141509 Query 83359 GGAAGGCAAGATCTC 83373 ||||| | |||||| Sbjct 6141508 CGAAGGAAGGATCTC 6141494 >seq46 Length=8291226 Score = 96.9 bits (106), Expect = 4e-15 Identities = 115/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || ||||||||||| ||||| || ||||| ||||||| ||| | || Sbjct 7768249 TTACCTGGTATCCAAACTGGTTACAGGGGAAGCCCAGCACGACCAGCCGCCGGG--GGTA 7768306 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 ||| || |||| ||| | ||| ||||| ||||| |||||| | |||||||| || | Sbjct 7768307 -GCGGGCTTGGAGCTGGTTGAGCTGGGTGTAATCCCGCACCGTGGTGCCTCAGAGCGAAG 7768365 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 | || ||||| || || | || |||||||| || Sbjct 7768366 CCACATTCTCAATCAGGACCACGCGGCCCCGGAA 7768399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 207/302 (69%), Gaps = 12/302 (4%) Strand=Plus/Plus Query 83065 CTCGATGTCGGGCTCCACGGCCAGGGTCTGG-CAG-CGGTGGCTGTACCTGCGCACGGGC 83122 || |||||||||||||| || || ||| || ||| ||||||| | || | || Sbjct 7767848 CTGGATGTCGGGCTCCA--GCTGGGCCGTGGGCACACGGGGGCTGTAGCGCCGGAACGGT 7767905 Query 83123 GTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACT 83182 || |||| ||||||| ||||||||| || ||||||| | ||| ||| | ||| Sbjct 7767906 TCCCCCTCAGGCCCCACCAGGAACTTCTCAAAATTCCAGGAGATATCGGAGCGCCGCACA 7767965 Query 83183 GGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATG-TCGTCGCTAGGCGC 83241 || |||| | | | |||| ||| || || ||| || | ||||| || || Sbjct 7767966 GGGCTCCAGACGACAAAGCGGGGCTCGGCCAGCAG-GTGTGCAGGCTCGTCAGCCGGTGC 7768024 Query 83242 CGGCAGG-GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCACCGTTGACCTC 83298 |||||| | || | ||| ||||||| | ||||| || | | | |||| |||| Sbjct 7768025 AGGCAGGTGAGCCTTG-AGGTAGGCGAACACGGGATGGGTGTCACTCC--CGTTCACCTG 7768081 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||| ||| || | ||||| ||||||||||| ||| || || ||||||||||| Sbjct 7768082 GCACTTCTGGAACAGGGTGAAGTTGGGCTCGAAGCCACCCCCGGGTCGCACGTGCTTCAG 7768141 Query 83359 GG 83360 || Sbjct 7768142 GG 7768143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606480328176000