Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_001734.1 Length=30536 Score E Sequences producing significant alignments: (Bits) Value seq169466 93.3 8e-15 >seq169466 Length=306 Score = 93.3 bits (102), Expect = 8e-15 Identities = 169/246 (69%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 13071 AAGTTTGACACAAGAAACTTTTATTTAGGATTTGACCCTGAAACTGAATTGGTCATG-CC 13129 ||||||||||| | ||||| | || |||||||| | |||| | |||||| || Sbjct 263 AAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACCCAGTCACTGGTCTTGTCATGCCC 204 Query 13130 TGGTTTTTATACTAACGAGGCATTTCACCCTGACATAATACTGAGTCCAGGCTGTGCAGT 13189 | | | ||||| ||||| || || || || ||||| || || || | | || Sbjct 203 TAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGGATCCCGGGGT 144 Query 13190 GGATTTTACCCACAGTAGGCTTAACAACTTTTTAGGCATTAGAAAAAGGCTGCCCTACCA 13249 ||| || |||||||| | || | |||||| || ||||| | || ||| |||| ||| Sbjct 143 GGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGCAACCCTTCCA 84 Query 13250 GGAGGGATTCATAATTAAATGGGAAGACCTACAGGGTGGTAATATTCCAGCCCTGTTAGA 13309 |||||| || | || | | || ||||| |||||||||| ||||| || ||||| || Sbjct 83 GGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCGCACTGTTGGA 24 Query 13310 CTTGGA 13315 |||| Sbjct 23 TGTGGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97240823534400