Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Serinus_20canaria_20[refseq_20GCF_5F000534875.1_202014-01-15] 304,400 sequences; 1,152,100,110 total letters Query= NC_001876.1 Length=34446 Score E Sequences producing significant alignments: (Bits) Value seq169466 120 7e-23 >seq169466 Length=306 Score = 120 bits (132), Expect = 7e-23 Identities = 182/256 (71%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 13502 TCGGGGTAAAGATCGATACGCGCAACTTTAGTCTGGGCTATGACCCGCAGACCCAG--TT 13559 ||||||||||| | || || |||||||| || ||||| | ||||| ||| | | | | Sbjct 271 TCGGGGTAAAGTTTGACACCCGCAACTTCAGACTGGGGTTTGACC--CAGTCACTGGTCT 214 Query 13560 AGTGACGCCC-GGCGTATACACCAATGAAGCTATGCATGCGGACATCGTGTTGCTGCCGG 13618 || | |||| | ||||| || || ||||| | ||| | |||||| | |||||||||| Sbjct 213 TGTCATGCCCTAGAGTATATACAAACGAAGCCTTCCATCCAGACATCATTTTGCTGCCGG 154 Query 13619 GCTGTGCTATAGACTTTACGCACTCCCGATTAAACAACCTCTTGGGCATACGCAAGCGTT 13678 | | ||||| || ||| ||| | | |||| | |||||||| |||||||| Sbjct 153 ATCCCGGGGTGGACTTCACCCACAGCCGCCTGAGCAACTTGTTGGGCATCCGCAAGCGGC 94 Query 13679 TTCCGTACCAAGAGGGCTTCGTCATCTCCTATGAGGACCTTAAGGGGGGTAACATCCCCG 13738 || | ||| |||||||| ||| |||| || ||||| |||| |||||||| |||| Sbjct 93 AACCCTTCCAGGAGGGCTTTAGGATCACCTACGATGACCTGGAGGGTGGTAACATTCCCG 34 Query 13739 CTTTGATGGACGTGGA 13754 | || |||| ||||| Sbjct 33 CACTGTTGGATGTGGA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109707595782400